1 5' 3' | 2 5' 3' | 3 5' 3' |
GATGGCCCCATTCCCCGATGCAAACCTTTCAAGTATACTTACGAGAAGGAGATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAATgtaaccttcctttcttttcctcttattttcccctctaactgccaaacaaacatttcactctctctacaattccag
species | Glycine max |
transcript | GLYMA04G00350.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAAT GCATTTACTCTCCTAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAAAGEST: gi|151396466|gb|EV266343.1|EV266343
genomic: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAATgtaaccttcc ... acaattccagGCATTTACTCTCCTAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAAAG
EST: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAAT GCATTTACTCTCCTAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAAEST: gi|11687605|gb|BF595281.1|BF595281
genomic: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAATgtaaccttcc ... acaattccagGCATTTACTCTCCTAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAA
EST: GATTGTCATGTATGCTTATTTCAGGAAGCTCGATTACTTTTTCAACGAAT GCATTTACTCGTC-TAATGCAEST: gi|14011650|gb|BG726572.1|BG726572
genomic: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAATgtaaccttcc ... acaattccagGCATTTACTC-TCCTAATGCA
EST: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAAT GCATTTACTCTCCTAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAAAG
genomic: GATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAATgtaaccttcc ... acaattccagGCATTTACTCTCCTAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGCCCCATTCCCCGATGCAAACCTTTCAAGTATACTTACGAGAAGGAGATTGTCATGTATGCTTATTTCAAGAAGCTCGATTACTTTTCCACCGAATgtaaccttcctttcttttcctcttattttcccctctaactgccaaacaaacatttcactctctctacaattccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC