1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATCAATCAAATAAATGGCAACTGAACATGAAGACGATTTCAAGGATGAGAAGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcctccctttcattccattaccaaattagggtttcttttcaccactctattattggctttcagctctgaattatatgtaattgaggttctgtt...
species | Glycine max |
transcript | GLYMA03G42370.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATNNNNNNNGCCGAGAAGGAAATCAAAEST: gi|213589227|gb|DB957759.1|DB957759
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
EST: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATNNNNNNNGCCGAGAAGGAAATCAAAEST: gi|151405667|gb|EV275481.1|EV275481
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
EST: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATNNNNNNNGCCGAGAAGGAGATCAAAEST: gi|193409954|gb|FK370747.1|FK370747
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
EST: AGAATCCCCGCCCC-TCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATAAAAAA-GCCGAGAAGGAAATCAAAEST: gi|192301329|gb|FG990219.1|FG990219
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
EST: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATNNNNNNNGCCGAGAAGGAAATCAAAEST: gi|213600299|gb|DB970277.1|DB970277
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
EST: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATNNNNNNNGCCGAGAAGGAAATCAAAEST: gi|213611619|gb|DB969007.1|DB969007
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
EST: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTAT GGTTTGGGGCCTTATTCCACCAGCATNNNNNNNGCCGAGAAGGAAATCAAA
genomic: AGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcc ... tgcaatgcagGGTTTGGGGCCTTATTCCACCAGCATAAAAAAAGCCGAGAAGGAAATCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAATCAAATAAATGGCAACTGAACATGAAGACGATTTCAAGGATGAGAAGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTTCTCAAAACCTATgtatgtatcctccctttcattccattaccaaattagggtttcttttcaccactctattattggctttcagctctgaattatatgtaattgaggttctgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctt