1 5' 3' | 2 5' 3' |
CTATCCGAGTCCGAGATCCGTCAACTCTGCGTAGTTTCCAGAGAAATTTTCTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTGgtaattattttcttcttattacctggccgtgtctaatttggtcatattctaacctggagaactaatccttactcttaattttggggtttggacatgatct...
species | Glycine max |
transcript | GLYMA03G41200.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTG GTGATGTACATGGGCAATATTCTGATCTTTTAAGGCTTTTTGAGTACGGTGEST: gi|192328341|gb|FK020052.1|FK020052
genomic: CTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTGgtaattattt ... gatgtttcagGTGATGTACATGGGCAATATTCTGATCTTTTAAGGCTTTTTGAGTACGGTG
EST: CTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTG GTGATGTACATGGGCAATATTCTGATCTTTTAAGGCTTTTTGAGTACGGTG
genomic: CTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTGgtaattattt ... gatgtttcagGTGATGTACATGGGCAATATTCTGATCTTTTAAGGCTTTTTGAGTACGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATCCGAGTCCGAGATCCGTCAACTCTGCGTAGTTTCCAGAGAAATTTTCTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTGgtaattattttcttcttattacctggccgtgtctaatttggtcatattctaacctggagaactaatccttactcttaattttggggtttggacatgatct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttggggt