1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCAAACTAGAAAGGAGAATAAAGAAATGGGCGCAACGAAGAGTGGACGAGTTAAACTTGGAACACAAGGCCTTGAGgtggtatatgatgttaaacaaactacattaattaattatttgctcttattttgatgctactaatataatag
species | Glycine max |
transcript | GLYMA03G40870.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGAGTGGACGAGTTAAACTTGGAACACAAGGCCTTGAG GTTTCAAAATTGGGATTCGGATGTCTGGGTCTTACTGGAGCGTATAATGAGEST: gi|151407626|gb|EV277441.1|EV277441
genomic: AAGAGTGGACGAGTTAAACTTGGAACACAAGGCCTTGAGgtggtatatg ... aatataatagGTTTCAAAATTGGGATTCGGATGTCTGGGTCTTACTGGAGCGTATAATGAG
EST: TGGGCGCAACGAAGAGTGGACGAGTTAAACTTGGAACACAAGGCCTTGAG GTTTCAAAATTGGGATTCGGATGTCTGGGTCTTACTGGAGCGTATAATGAG
genomic: TGGGCGCAACGAAGAGTGGACGAGTTAAACTTGGAACACAAGGCCTTGAGgtggtatatg ... aatataatagGTTTCAAAATTGGGATTCGGATGTCTGGGTCTTACTGGAGCGTATAATGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAACTAGAAAGGAGAATAAAGAAATGGGCGCAACGAAGAGTGGACGAGTTAAACTTGGAACACAAGGCCTTGAGgtggtatatgatgttaaacaaactacattaattaattatttgctcttattttgatgctactaatataatag
- - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - AGTGGA