Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTACTCAAACTCTCCCTTGCGCGCTCCTATATAATCATTTCATATAACCTTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAGgttcgttttcgttcttgtataattactcggtttagttcactaccattgaagtaaattgctcatttctgtgccatttgccatcaaactttttcataggaag...

Basic information

species Glycine max
transcript GLYMA03G40260.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|4294681|gb|AI442225.1|AI442225
EST:     TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAG                         GCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTT
genomic: TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAGgttcgttttc ... ggtgactcagGCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTT
EST: gi|254325386|gb|GR838267.1|GR838267
EST:     TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAG                         GCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
genomic: TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAGgttcgttttc ... ggtgactcagGCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
EST: gi|151408278|gb|EV278086.1|EV278086
EST:     TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAG                         GCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
genomic: TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAGgttcgttttc ... ggtgactcagGCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
EST: gi|192294572|gb|FG986421.1|FG986421
EST:     TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAG                         GCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
genomic: TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAGgttcgttttc ... ggtgactcagGCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
EST: gi|7640336|gb|AW734640.1|AW734640
EST:     TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAG                         GCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG
genomic: TTTGCCTCTGGCTCATTACTCTGCTCAATCTCGCTTGGTGCTTTCTCCAGgttcgttttc ... ggtgactcagGCATGGGAGTGCACGTCTGGGAGAAAGTTGACATGGAACCTGTTATCCTTG