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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCTTCCCCCGACACGCTCCTCAACACTCCCAAAAACTCCGACACCCCTCCTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAAgtaattatatatttttctcacttatggctcagtatttgatttctcctaggttttctgctaacttggcatgctactttgtacttgctgttacaaattgaaa...

Basic information

species Glycine max
transcript GLYMA03G39570.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192293965|gb|FG987134.1|FG987134
EST:     CTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAA                         GTTGAAAGATCTGTTTCATACAACGAACACCGACCCAGAAGGCCACCGCCT
genomic: CTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAAgtaattatat ... gttgaattagGTTGAAAGATCTGTTTCATACAACGAACACCGACCCAGAAGGCCACCGCCT
EST: gi|209702632|gb|BW660629.1|BW660629
EST:     CTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAA                         GTTGAAAGATCTGTTTCATACAACGAACACCGACCCAGAAGGCCACCGCCT
genomic: CTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAAgtaattatat ... gttgaattagGTTGAAAGATCTGTTTCATACAACGAACACCGACCCAGAAGGCCACCGCCT
EST: gi|7478792|gb|AW666408.1|AW666408
EST:     CTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAA                         GTTGAAAGATCTGTTTCATACAACGAACACCGACCCAGAAGGCCACCGCCT
genomic: CTTTTCTCGACATCTTCGACTCCCCCAAACTCATGGCCACTCCCGCTCAAgtaattatat ... gttgaattagGTTGAAAGATCTGTTTCATACAACGAACACCGACCCAGAAGGCCACCGCCT