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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAATTCTCGAACTCCAAGCTTCTGCAATCCTCAAGAACTTCTAAATTCTTGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGCGTTCAGgtttcatgcttctctgatttgtctttgtttgttggaatttaagttatgtgctgtttttcttttggcttgattttttttttctttggtgtgtttgcgtttgaag

Basic information

species Glycine max
transcript GLYMA03G39290.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209726114|gb|BW675288.1|BW675288
EST:     TGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGTGTTCAG                         ATCGGTGTTTGAAGATCGAGATTATTGGCGCCTTTCGGATTTGAGGAGCAG
genomic: TGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGCGTTCAGgtttcatgct ... gcgtttgaagATCGGTGTTTGAAGATCGAGATTATTGGCGCCTTTCGGATTTGAGGAGCAG
EST: gi|209697859|gb|BW670102.1|BW670102
EST:     TGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGTGTTCAG                         ATCGGTGTTTGAAGATCGAGATTATTGGCGCCTTTCGGATTTGAGGAGCAG
genomic: TGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGCGTTCAGgtttcatgct ... gcgtttgaagATCGGTGTTTGAAGATCGAGATTATTGGCGCCTTTCGGATTTGAGGAGCAG
EST: gi|213590590|gb|DB968126.1|DB968126
EST:     TGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGTGTTCAG                         ATCGGTGTTTGAAGATCGAGATTATTGGCGCCTTTCGGATTTGAGGAGCAG
genomic: TGAGGGATTTGAGGTTGTGAACACTCCGTGGCTTCAGATTTGGCGTTCAGgtttcatgct ... gcgtttgaagATCGGTGTTTGAAGATCGAGATTATTGGCGCCTTTCGGATTTGAGGAGCAG