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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCAAGAGTGGTGGCACTCCAACAGAACCAACTATCTTTCTCTACCTTAGCTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatcatcatcatcactctcatttcattcatttagcagtagatggtgaacaacattctatgttcatgtatttattactagtacttggttggtaatc...

Basic information

species Glycine max
transcript GLYMA03G38930.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192321048|gb|FK012416.1|FK012416
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120534298|gb|EH262431.1|EH262431
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120534123|gb|EH262256.1|EH262256
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120534506|gb|EH262639.1|EH262639
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209697177|gb|BW672942.1|BW672942
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|10232858|gb|BE801746.1|BE801746
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213606521|gb|DB971317.1|DB971317
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120496123|gb|EH224290.1|EH224290
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213608598|gb|DB967101.1|DB967101
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120531123|gb|EH259256.1|EH259256
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213617909|gb|DB967299.1|DB967299
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|15287169|gb|BI471060.1|BI471060
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213617923|gb|DB967650.1|DB967650
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209708025|gb|BW657080.1|BW657080
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|17518618|gb|BM187660.1|BM187660
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213589761|gb|DB955456.1|DB955456
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209721697|gb|BW682538.1|BW682538
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209701640|gb|BW673126.1|BW673126
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213598124|gb|DB964155.1|DB964155
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|6667229|gb|AW278688.1|AW278688
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209715536|gb|BW682189.1|BW682189
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213602138|gb|DB962631.1|DB962631
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|151403281|gb|EV273091.1|EV273091
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213594012|gb|DB961928.1|DB961928
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120531139|gb|EH259272.1|EH259272
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|8670059|gb|BE191166.1|BE191166
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|120530457|gb|EH258590.1|EH258590
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|15199948|gb|BI424091.1|BI424091
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209723821|gb|BW682958.1|BW682958
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209709384|gb|BW668340.1|BW668340
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213601152|gb|DB964659.1|DB964659
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209709945|gb|BW676517.1|BW676517
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213614000|gb|DB960965.1|DB960965
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209728486|gb|BW663478.1|BW663478
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209718791|gb|BW671992.1|BW671992
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|11413480|gb|BF425491.1|BF425491
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|11413168|gb|BF425179.1|BF425179
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213607233|gb|DB965119.1|DB965119
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|10232367|gb|BE801255.1|BE801255
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|20811439|gb|BQ295917.1|BQ295917
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209715908|gb|BW650921.1|BW650921
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|6134475|gb|AW132868.1|AW132868
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|213589232|gb|DB957764.1|DB957764
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: gi|209721137|gb|BW665694.1|BW665694
EST:     CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG                         TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGCAAGAGTGGTGGCACTCCAACAGAACCAACTATCTTTCTCTACCTTAGCTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatcatcatcatcactctcatttcattcatttagcagtagatggtgaacaacattctatgttcatgtatttattactagtacttggttggtaatc

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcactctc