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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGAAGTGTTTTGCTCACAGAATTCCATAAAGAATAACCTCACAACCCTCCTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACCAAAGgcacgttttcctcttcttcttctttttttaccattttttttcctatttcttcccttttctcatttagttttatgtccttagatcggaactactatttcac...

Basic information

species Glycine max
transcript GLYMA03G38850.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151406384|gb|EV276199.1|EV276199
EST:     CTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACCAAAGTAG                       
genomic: CTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACC-AA--AGgcacgttttc ... attccagt
EST: gi|192296806|gb|FG993104.1|FG993104
EST:     CTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACCAAAGTAG                       
genomic: CTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACC-AA--AGgcacgttttc ... attccagt
EST: gi|151410500|gb|EV280315.1|EV280315
EST:     CTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACCAAAG                         GCAAGAGATTGGGTTTTAAGCTGTTAAAATAACAGTGAAGTTTGGTACAAA
genomic: CTTCCTTTTCCTTTACTTTTTCTTACATACATACATTCATGCCACCAAAGgcacgttttc ... attccagtagGCAAGAGATTGGGTTTTAAGCTGTTAAAATAACAGTGAAGTTTGGTACAAA