1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACTACTTTCTGCGATTCCTCGCTGTAGAATTTGTCATGAAGAAGAGTTTGAAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatcacataatacataatttcttaatcttaagcacttgtttttctgttattaacttatttttcttcctggaattttttttcattttaattctcgtcaataactgcgtttttgttttgcag
species | Glycine max |
transcript | GLYMA03G37740.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|192318633|gb|FK008293.1|FK008293
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|298170651|gb|HO019275.1|HO019275
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|151396764|gb|EV266637.1|EV266637
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|192318632|gb|FK008292.1|FK008292
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|192319126|gb|FK009094.1|FK009094
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACAEST: gi|192306387|gb|FG996147.1|FG996147
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
EST: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAG TTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
genomic: AAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatc ... tgttttgcagTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAAAAAGGAAATACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTACTTTCTGCGATTCCTCGCTGTAGAATTTGTCATGAAGAAGAGTTTGAAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGgtaagtaatcacataatacataatttcttaatcttaagcacttgtttttctgttattaacttatttttcttcctggaattttttttcattttaattctcgtcaataactgcgtttttgttttgcag
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