1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAAGCAACCGTCATAACCGTCAATTGCCCCGACAAGACCGGTCTGGGTTGTGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAGgtaagccgccttccaatttatcttcactttcttgtgttacgtttgcgagattgattcgttttttttttttttttttagttttattagaatgttagttttc...
species | Glycine max |
transcript | GLYMA03G34210.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAG ACGTTTCCACCGACGGAAAATGGTGCTACATAGTATTCTGGGTGGTGGGGAEST: gi|24137047|gb|BU927557.1|BU927557
genomic: TGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAGgtaagccgcc ... tgcaatgaagACGTTTCCACCGACGGAAAATGGTGCTACATAGTATTCTGGGTGGTGGGGA
EST: TGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAG ACGTTTCCACCGACGGAAAATGGTGCTACATAGTATTCTGGGTGGTGGGGA
genomic: TGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAGgtaagccgcc ... tgcaatgaagACGTTTCCACCGACGGAAAATGGTGCTACATAGTATTCTGGGTGGTGGGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGCAACCGTCATAACCGTCAATTGCCCCGACAAGACCGGTCTGGGTTGTGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAGgtaagccgccttccaatttatcttcactttcttgtgttacgtttgcgagattgattcgttttttttttttttttttagttttattagaatgttagttttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG