1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TTGATCATCACATGAAAATGGTGTCCGAAGGCATTCTCCTGGGCATTGGTAACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctgactcactcactctcttttccatgccgttttgctccactctcctcgtcgtttcgtttaaccttgcacaccgttccataggtttactggatggatcaacgacgtcgtaaatcgctttgttcgcttctgaatgatttttttacttgtttttgtgtttgatag
species | Glycine max |
transcript | GLYMA03G33910.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAA ATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCEST: gi|298190129|gb|HO032250.1|HO032250
genomic: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctg ... tgtttgatagATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCC
EST: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAA ATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCEST: gi|7684823|gb|AW755471.1|AW755471
genomic: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctg ... tgtttgatagATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCC
EST: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAA ATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCEST: gi|254342530|gb|GR858692.1|GR858692
genomic: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctg ... tgtttgatagATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCC
EST: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAA ATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCEST: gi|298189605|gb|HO038008.1|HO038008
genomic: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctg ... tgtttgatagATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCC
EST: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAA ATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCC
genomic: AACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctg ... tgtttgatagATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGATCATCACATGAAAATGGTGTCCGAAGGCATTCTCCTGGGCATTGGTAACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAgtaccatctgactcactcactctcttttccatgccgttttgctccactctcctcgtcgtttcgtttaaccttgcacaccgttccataggtttactggatggatcaacgacgtcgtaaatcgctttgttcgcttctgaatgatttttttacttgtttttgtgtttgatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGCCGTCG