1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTAGGTAAGAATGCAAGATACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAGgttgtaactcttcttatctatcccactttttttcttagatttcattctcttccctttcaattcgattcaccttttcacttttggttccgaatctctatcg...
species | Glycine max |
transcript | GLYMA03G33270.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAG AGCTAGAAGAAATCAACGATGCCTCGCTATGATGATAAATATGGTAATACCEST: gi|192299576|gb|FG989987.1|FG989987
genomic: TACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAGgttgtaactc ... tgttttgcagAGCTAGAAGAAATCAACGATGCCTCGCTATGATGATAAATATGGTAATACC
EST: TACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAG AGCTAGAAGAAATCAACGATGCCTCGCTATGATGATAAATATGGTAATACCEST: gi|193440148|gb|FK408535.1|FK408535
genomic: TACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAGgttgtaactc ... tgttttgcagAGCTAGAAGAAATCAACGATGCCTCGCTATGATGATAAATATGGTAATACC
EST: TACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAG AGCTAGAAGAAATCAACGATGCCTCGCTATGATGATAAATATGGTAATACC
genomic: TACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAGgttgtaactc ... tgttttgcagAGCTAGAAGAAATCAACGATGCCTCGCTATGATGATAAATATGGTAATACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGGTAAGAATGCAAGATACCGATCCACTTTGAAAGGGTTCACGAAGAAACACCAATCCGCTCCGAGgttgtaactcttcttatctatcccactttttttcttagatttcattctcttccctttcaattcgattcaccttttcacttttggttccgaatctctatcg
- - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - AAGAAA