1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAGCTTGGAGCAGGGCAAAGGAAGATTCATGAAGCCCGACGAAGCCTCCGCTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCATgtaagaccaccaccttttttcgattctcctcctctgtttggatgtgctttgcttcaattgtttcgggaagagctattatatggttagaattactttactc...
species | Glycine max |
transcript | GLYMA03G31510.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCAT GTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCTCATCCTEST: gi|209727968|gb|BW666688.1|BW666688
genomic: CTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCATgtaagaccac ... cctcttgcagGTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCTCATCCT
EST: CTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCAT GTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCTCATCCTEST: gi|213593007|gb|DB969861.1|DB969861
genomic: CTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCATgtaagaccac ... cctcttgcagGTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCTCATCCT
EST: CTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCAT GTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCTCATCCT
genomic: CTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCATgtaagaccac ... cctcttgcagGTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCTCATCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTTGGAGCAGGGCAAAGGAAGATTCATGAAGCCCGACGAAGCCTCCGCTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATAATAGAGCTAAGCATgtaagaccaccaccttttttcgattctcctcctctgtttggatgtgctttgcttcaattgtttcgggaagagctattatatggttagaattactttactc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcctcc