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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGCCACACACATACATCATCAAAAAACACACACGACACACTCCCATACACACACGTTGTCTCGCACACATTCCTTCATTCCGCAGgtatagccacgttctctcttccctctttcatccccggtgataagaacaagcacccaccgtttaacgctaattatatgtgtttttggtttttttttttttttttgcagcag

Basic information

species Glycine max
transcript GLYMA03G30110.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16346204|gb|BI971799.1|BI971799
EST:     CACACTCCCATACACACACGTAGTCTCGCACACATTCCTTCATTCCGCAGCAG                       
genomic: CACACTCCCATACACACACGTTGTCTCGCACACATTCCTTCATT-C-C-GCAGgtatagccac ... tttgcagc
EST: gi|193642633|gb|FK593331.1|FK593331
EST:     TTCCTTCATTCCGCAGCAG                       
genomic: TTCCTTCATT-C-C-GCAGgtatagccac ... tttgcagc
EST: gi|208103976|gb|GD902651.1|GD902651
EST:     CACACTCCCATACACACACGTTGTCTCGCACACATTCCTTCATTCCGCAGCAG                       
genomic: CACACTCCCATACACACACGTTGTCTCGCACACATTCCTTCATT-C-C-GCAGgtatagccac ... tttgcagc
EST: gi|254315473|gb|GR825282.1|GR825282
EST:     CACACTCCCATACACACACGTTGTCTCGCACACATTCCTTCATTCCGCAGCAG                       
genomic: CACACTCCCATACACACACGTTGTCTCGCACACATTCCTTCATT-C-C-GCAGgtatagccac ... tttgcagc