Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTGGGTGTTGCTTGAATCCGTGGAAAGTTCATTTATTTTCGATTTTCATGCGACCAGgttgtgcaagatcgcttatttatttatttatttatttatttttacccttttggatgtcaaatttcatgtgcttcccttttgcaagtttatgttgttcagc...

Basic information

species Glycine max
transcript GLYMA03G28320.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120530258|gb|EH258392.1|EH258392
EST:     TTGCTTGAATCCGTGGAAAGTTCATTTATTTTCGATTTTCATGCGACCAG                         GGACTTTTGGGGCTAATAAAGTTTCTGAAGAGATAAGATGATCGTTGTGCT
genomic: TTGCTTGAATCCGTGGAAAGTTCATTTATTTTCGATTTTCATGCGACCAGgttgtgcaag ... atggattcagGGACTTTTGGGGCTAATAAAGTTTCTGAAGAGATAAGATGATCGTTGTGCT
EST: gi|120530210|gb|EH258344.1|EH258344
EST:     TTGCTTGAATCCGTGGAAAG-TCATTTATTTTCGATTTTCATGCGACCAG                         GGACTTTTGGGGCTAATAAAGTTTCTGAAGAGATAAGATGATCGTTGTGCT
genomic: TTGCTTGAATCCGTGGAAAGTTCATTTATTTTCGATTTTCATGCGACCAGgttgtgcaag ... atggattcagGGACTTTTGGGGCTAATAAAGTTTCTGAAGAGATAAGATGATCGTTGTGCT