1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctaccagtcattcacataggaaaaaaaaatgggagaagaaaagtgaaaaccatttggtttcattgttttcaatcattttctgatcaaccttctatttgtcattggcag
species | Glycine max |
transcript | GLYMA03G27760.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAG GAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTTEST: gi|213597584|gb|DB962550.1|DB962550
genomic: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctacca ... tcattggcagGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
EST: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAG GAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTTEST: gi|23726100|gb|BU761030.1|BU761030
genomic: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctacca ... tcattggcagGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
EST: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAG GAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTTEST: gi|151401707|gb|EV271520.1|EV271520
genomic: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctacca ... tcattggcagGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
EST: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAG GAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTTEST: gi|213617303|gb|DB972913.1|DB972913
genomic: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctacca ... tcattggcagGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
EST: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAG GAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTTEST: gi|254320171|gb|GR829359.1|GR829359
genomic: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctacca ... tcattggcagGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
EST: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAG GAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
genomic: CACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctacca ... tcattggcagGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGgtacctaccagtcattcacataggaaaaaaaaatgggagaagaaaagtgaaaaccatttggtttcattgttttcaatcattttctgatcaaccttctatttgtcattggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT