1 5' 3' | 2 5' 3' | 3 5' 3' |
AATCGTGAGTAACAGCAGAGCAGAACACCGATAAATCGCTATGACTGCTCAGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCATgtattaattcacacctttattctcccttattagctattttaatttaattgtgaagtgatttagaattaggtttaaaattaattctattctgattcaaggt...
species | Glycine max |
transcript | GLYMA03G27580.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCAT GATGATGAGCCTGTAGTTGAGGATGATGATGAGGATGACGAAGATGACGACEST: gi|208277721|gb|GE075288.1|GE075288
genomic: AGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCATgtattaattc ... tcttttgtagGATGATGAGCCTGTAGTTGAGGATGATGATGAGGATGACGAAGATGACGAC
EST: AGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCAT GATGATGAGCCTGTAGTTGAGGATGATGATGAGGATGACGAAGATGACGAC
genomic: AGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCATgtattaattc ... tcttttgtagGATGATGAGCCTGTAGTTGAGGATGATGATGAGGATGACGAAGATGACGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATCGTGAGTAACAGCAGAGCAGAACACCGATAAATCGCTATGACTGCTCAGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCATgtattaattcacacctttattctcccttattagctattttaatttaattgtgaagtgatttagaattaggtttaaaattaattctattctgattcaaggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctccc