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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCTCCACAACATCACATTCGTTCTCTCCGATGATTCCAGCAGGAAAAACACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATgtaacactctcattcatttattgctttcatcatatgcaattagcttaatagctttcgaatttcaattttaaggcttgtttggtaacctgtttaattttgg...

Basic information

species Glycine max
transcript GLYMA03G14690.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209727570|gb|BW651988.1|BW651988
EST:     ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAAT                         AGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
genomic: ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATgtaacactct ... gcgtggttagAGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
EST: gi|298176016|gb|HO015421.1|HO015421
EST:     ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAAT                         AGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
genomic: ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATgtaacactct ... gcgtggttagAGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
EST: gi|213610387|gb|DB958844.1|DB958844
EST:     ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAAT                         AGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
genomic: ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATgtaacactct ... gcgtggttagAGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
EST: gi|209719412|gb|BW674492.1|BW674492
EST:     ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAAT                         AGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
genomic: ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATgtaacactct ... gcgtggttagAGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
EST: gi|254341066|gb|GR854794.1|GR854794
EST:     ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAAT                         AGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG
genomic: ACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATgtaacactct ... gcgtggttagAGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAG