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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGACCCTGTATGCGACTAACCCTAGTTCATTGCACTGCAACTTAGCCACTTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACTgtgagtagcaactttctgctcctgaaggcttcatctgtggtcttcgtttcgtttttttgatgtggtttttgcttacccacttgaataaagttttgatctttcgttttatttttcttttgggtgtttttcag

Basic information

species Glycine max
transcript GLYMA03G07420.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192330310|gb|FK020580.1|FK020580
EST:     TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACT                         AATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
genomic: TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACTgtgagtagca ... tgtttttcagAATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
EST: gi|7685524|gb|AW756172.1|AW756172
EST:     TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACT                         AATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
genomic: TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACTgtgagtagca ... tgtttttcagAATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
EST: gi|151408709|gb|EV278517.1|EV278517
EST:     TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACT                         AATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
genomic: TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACTgtgagtagca ... tgtttttcagAATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
EST: gi|192299906|gb|FG991780.1|FG991780
EST:     TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACT                         AATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA
genomic: TTGAACCCCCTTCGTAAGCCTCTTCACATCTTCACTTCTTCTTCCGCACTgtgagtagca ... tgtttttcagAATACGAAACCAGAGGGAATTCACAAAAGAGGTTACCATGTCGGACGATGA