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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTACTATGCTGTTGTTTTGACCAATTATGGCCCTGCTTTGTATGCTGGAGGACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttctagagtttctttttttatcttgaattttgtgactttttaggttttttgagtttttcttatttgtttttataggaaattcagtgtaagaagg...

Basic information

species Glycine max
transcript GLYMA03G02930.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21601051|gb|BQ611382.1|BQ611382
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|192301934|gb|FG995552.1|FG995552
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|192334158|gb|FK026539.1|FK026539
EST:     GGCTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|213599085|gb|DB966387.1|DB966387
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|192325698|gb|FK015055.1|FK015055
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|12496102|gb|BG046895.1|BG046895
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|27424346|gb|CA935866.1|CA935866
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|192325928|gb|FK016605.1|FK016605
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
EST: gi|14125611|gb|BG790049.1|BG790049
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTG                         TTGGTTATGCTGCTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATAGCTTGgtaagcttct ... gatttcacagTTGGTTATGCTGTTGTGGAGTTACTTTTCTGTTGTTTTTACCGATCCGGGG