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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGTGATAAGACTGTCTATGTGGTTGACTTGTTAACTCTTGAAGGAATTACTTACCATAAAAACTGCTTCAAATGCAGCCACTGCAAGGGATGTCTTACGgtacatatagctctccattttcttgttccttttctgggttattctcctttcaatgttattattgtctctttgtaacatcacatacaattggaatgaaggt...

Basic information

species Glycine max
transcript GLYMA03G01590.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G01590.1 (Glycine max), 5'ss of exon 1
lower sequence: GRMZM2G134752_T02 (Zea mays), 5'ss of exon 1
ATGTGATAAGACTGTCTATGTGGTTGACTTGTTAACTCTTGAAGGAATTACTTACCATAAAAACTGCTTCAAATGCAGCCACTGCAAGGGATGTCTTACGgtacatat------------------agctctccattttcttgttccttttctg-ggttattctcctttcaatgttattattgtctctttgtaacatcacatacaattggaatgaaggt----------------------------------------------------
 || || ||||| ||| |  |  | ||| || | ||    || ||  |  | ||||| || | |||||||||||||||||||||||||||    ||  ||||||  ||                  ||| ||| |   ||||  ||||     |   ||    |||| | |||  | | ||      ||  |  |   | ||   | || |  |||                                                       
CTGCGACAAGACGGTCCACTTCATCGACCTGCTCACCGCCGACGGCGTCTCGTACCACAAGACCTGCTTCAAATGCAGCCACTGCAAGGGCGTCCTCTCGgtacgcatgccgcatggcccccctcaagccctcaacactcttactcctcacgcgcatttgccttcctgtgaatcctgtgat-acgcattcatcccgatagatgacaatgtagggaataatacgggctcatattaattcttttctgcatccgtcggtcgatctcctctctag