1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TCAACTCAGATACCAACTCGGAGTTTCGGACTCATCGCCTCCGATTCAAAACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttctttttctccatttccccctctccacttcgtgtcgtagtaatctttctcctgtagttaattttttcgcttgctaaaatcgcttcctttatt...
species | Glycine max |
transcript | GLYMA03G00670.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACGACATGGCTTCGG ATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGGEST: gi|151398925|gb|EV268796.1|EV268796
genomic: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttc ... tattctgtagATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
EST: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGG ATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGGEST: gi|192307527|gb|FK002045.1|FK002045
genomic: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttc ... tattctgtagATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
EST: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGG ATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGGEST: gi|208307928|gb|GE105884.1|GE105884
genomic: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttc ... tattctgtagATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
EST: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGG ATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGGEST: gi|298189905|gb|HO038308.1|HO038308
genomic: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttc ... tattctgtagATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
EST: ACCCTAACTCGGACCTCAGACTCAATCGATTTCATACGACATGGCTTCGG ATGCTGATATGGAGGACTATGGATATGAGTACTCAGATGAGGAGCAAGAGGEST: gi|151398223|gb|EV268101.1|EV268101
genomic: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttc ... tattctgtagATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
EST: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGG ATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
genomic: ACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttc ... tattctgtagATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAACTCAGATACCAACTCGGAGTTTCGGACTCATCGCCTCCGATTCAAAACCCTAACTCGGACCTCAAACTCAATCGATTTCATACAACATGGCTTCGGgtacctgttctttttctccatttccccctctccacttcgtgtcgtagtaatctttctcctgtagttaattttttcgcttgctaaaatcgcttcctttatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctttctcc