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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCGTTACTATTATGACTTGTTAGCTGAGCGACACCGAACGCGCTTTCAAGTCTCTTTGAGTTGGGTCCATTCACCAATCTCTCTTGCAGCCTTGCAGgtgtcacaacatttcatctttagaacttagaaccagtccatgctttattgcttcaccttagatatcacacttttgctccttccacttcatatcttcaaattttctttttaatatgtttacaacttctaactttgcttccttgggctattaag

Basic information

species Glycine max
transcript GLYMA02G43150.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209701625|gb|BW667366.1|BW667366
EST:     AAGTCTCTTTGAGTTGGGTCCATTCACCAATCTCTCTTGCAGCCTTGCAG                         CTCCATCATCCAAGCCAAGGTTTGTTTCTTGCAGAAAAGACGGTTTTCTTG
genomic: AAGTCTCTTTGAGTTGGGTCCATTCACCAATCTCTCTTGCAGCCTTGCAGgtgtcacaac ... ggctattaagCTCCATCATCCAAGCCAAGGTTTGTTTCTTGCAGAAAAGACGGTTTTCTTG
EST: gi|209707904|gb|BW662097.1|BW662097
EST:     AAGTCTCTTTGAGTTGGGTCCATTCACCAATCTCTCTTGCAGCCTTGCAG                         CTCCATCATCCAAGCCAAGGTTTGTTTCTTGCAGAAAAGACGGTTTTCTTG
genomic: AAGTCTCTTTGAGTTGGGTCCATTCACCAATCTCTCTTGCAGCCTTGCAGgtgtcacaac ... ggctattaagCTCCATCATCCAAGCCAAGGTTTGTTTCTTGCAGAAAAGACGGTTTTCTTG