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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACGCCGCTCTTGACGCCGGTTGCCGTTAGGGTTCCGCCGTGTGATTATTCTTGGAATGATGTTTGCGGCGGTGGCTGTGGATTCGCTATTGCTATATCAGgtgccttacctttttcaccggtctttttgattttgttgcggtttttgttttcagtttaagaattggaggctttgtttgacctgtggtctggtccctttga...

Basic information

species Glycine max
transcript GLYMA02G41810.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193668760|gb|FK611906.1|FK611906
EST:     TTGGAATGATGTTTGCGGCGGTGGCTGTGGATTCGCTATTGCTATATCAG                         AATCAGGGAAGCTCATCACATGGGGCTCAACAGATGGTCTAGGCCAAAGCT
genomic: TTGGAATGATGTTTGCGGCGGTGGCTGTGGATTCGCTATTGCTATATCAGgtgccttacc ... ccttaatcagAATCAGGGAAGCTCATCACATGGGGCTCAACAGATGATCTAGGCCAAAGCT
EST: gi|209710825|gb|BW665132.1|BW665132
EST:     TTGGAATGATGTTTGCGGCGGTGGCTGTGGATTCGCTATTGCTATATCAG                         AATCAGGGAAGCTCATCACATGGGGCTCAACAGATGATCTAGGCCAAAGCT
genomic: TTGGAATGATGTTTGCGGCGGTGGCTGTGGATTCGCTATTGCTATATCAGgtgccttacc ... ccttaatcagAATCAGGGAAGCTCATCACATGGGGCTCAACAGATGATCTAGGCCAAAGCT