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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCACCCTCCAAGTTCTGTCAAGTTGAGTCAACCCACTATAAAAGCTTCCTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAGgtaatccaaattctgggtcttcatgaaatccaaattttatgcatgttataagatgagcaactgttttctgttctgttagaatccttgcaaacgttttgga...

Basic information

species Glycine max
transcript GLYMA02G41320.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254321237|gb|GR827686.1|GR827686
EST:     CTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAG                         GAAAGGCTTTTCCTGGTGATGGGACACCTGAAACAAAAGAATCACCTCTTG
genomic: CTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAGgtaatccaaa ... tgctatacagGAAAGGCTTTTCCTGGTGATGGGACACCTGAAACAAAAGAATCACCTCTTG
EST: gi|6454289|gb|AW184972.1|AW184972
EST:     CTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAG                         GAAAGGCTTTTCCTGGTGATGGGACACCTGAAACAAAAGAATCACCTCTTG
genomic: CTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAGgtaatccaaa ... tgctatacagGAAAGGCTTTTCCTGGTGATGGGACACCTGAAACAAAAGAATCACCTCTTG
EST: gi|151410272|gb|EV280087.1|EV280087
EST:     CTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAG                         GAAAGGCTTTTCCTGGTGATGGGACACCTGAAACAAAAGAATCACCTCTTG
genomic: CTCCTTTTCTTCCCCTCTTGCCCCTCCACTTGTCAAATTGAATGTCAGAGgtaatccaaa ... tgctatacagGAAAGGCTTTTCCTGGTGATGGGACACCTGAAACAAAAGAATCACCTCTTG