Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192296205|gb|FG989041.1|FG989041EST: CATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAGCTAGCAG GGCTTTTAAGGTGTGGGAAGAGTTGCAGGCTCAGGTGGACAAATTACTTGA
genomic: CATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAGCTAGCAGgtctcctcaa ... cttcatgcagGGCTTTTAAGGTGTGGGAAGAGTTGCAGGCTCAGGTGGACAAATTACTTGA
EST:
gi|23728665|gb|BU762393.1|BU762393EST: CATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAGCTAGCAG GGCTTTTAAGGTGTGGGAAGAGTTGCAGGCTCAGGTGGACAAATTACTTGA
genomic: CATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAGCTAGCAGgtctcctcaa ... cttcatgcagGGCTTTTAAGGTGTGGGAAGAGTTGCAGGCTCAGGTGGACAAATTACTTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGAAGAAGGGGCCATGGACTGCAGAGGAGGATAAGAAGCTCATAAGCTTCATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAGCTAGCAGgtctcctcaatttaatccttaatttctagccattcaaatcatttatgaataatgaaatgccacagtttttcatgcttcatttgctatttggttatgaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT