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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTCGCTATAATCGCAATGGCCATGGCTCTTCCTCTTCGCAGACTCTCCTCCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATGgtataaatatacatttctttacattcatttcccctttcattctcttcataacactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttcttcgttgttgcag

Basic information

species Glycine max
transcript GLYMA02G38160.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15814712|gb|BI786987.1|BI786987
EST:     CCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATG                         TCCTCCTCGCTCTCCGCTCAGGAGAAAGACAAATCTCGCGCCGAT
genomic: CCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATGgtataaatat ... gttgttgcagTCCTCCTCGCTCTCCGCTCAGGAGAAAGACAAATCTCGCGCCGAT
EST: gi|24205505|gb|BU964758.1|BU964758
EST:     CCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATG                         TCCTCCTCGCTCTCCGCTCAGGAGAAAGACAAATCTCGCGCCGAT
genomic: CCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATGgtataaatat ... gttgttgcagTCCTCCTCGCTCTCCGCTCAGGAGAAAGACAAATCTCGCGCCGAT
EST: gi|6566248|gb|AW233929.1|AW233929
EST:     CCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATG                         TCCTCCTCGCTCTCCGCTCAGGAGAAAGACAAATCTCGCGCCGAT
genomic: CCACCCTCAACAAACCTCTCGCCAGCGCTACTTCCATTTATCATCGCATGgtataaatat ... gttgttgcagTCCTCCTCGCTCTCCGCTCAGGAGAAAGACAAATCTCGCGCCGAT