1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAAAAGTGGTAGGAAGAGTCTTGAACATCTTGAAGACAGACAGAAAATGGGTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatagttaaactacagtctcaagaaacaaagtctaaaatcagggtgaaactcattaaataagttgtaaaatcgacataattttataattttcaat...
species | Glycine max |
transcript | GLYMA02G16800.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATAAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|38193656|gb|CF922862.1|CF922862
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATAAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|192331125|gb|FK020345.1|FK020345
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|38193508|gb|CF922714.1|CF922714
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|38192642|gb|CF921848.1|CF921848
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|38193765|gb|CF922971.1|CF922971
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|151408599|gb|EV278407.1|EV278407
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|7925827|gb|AW831853.1|AW831853
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|38192866|gb|CF922072.1|CF922072
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTTEST: gi|38192483|gb|CF921689.1|CF921689
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
EST: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAG GATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
genomic: GTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatag ... ggtggcacagGATGCCAGGGGCAAAGATGTGAACCTCAACGCCTACAGGGGGAAAGTTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAAAGTGGTAGGAAGAGTCTTGAACATCTTGAAGACAGACAGAAAATGGGTGCTTCTCAATCAATCTCAGAAAAATCCTTTCATGAATTCACTGTCAAGgtacagatagttaaactacagtctcaagaaacaaagtctaaaatcagggtgaaactcattaaataagttgtaaaatcgacataattttataattttcaat
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