Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|19348682|gb|BM893214.1|BM893214EST: AATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTG AAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGA
genomic: AATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGgtaattacat ... tgaaatacagAAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGA
EST:
gi|22525705|gb|BU084516.1|BU084516EST: AATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTG AAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGA
genomic: AATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGgtaattacat ... tgaaatacagAAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGA
EST:
gi|19453627|gb|BM955037.1|BM955037EST: AATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTG AAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGA
genomic: AATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGgtaattacat ... tgaaatacagAAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATTGTTTACTATCTTTGCAACCAAGCCACATCAAGACCATGCCCTGCATCAATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGgtaattacatgtattagcatatattacaatatcacttgctaataaaacttttgtgcttataagaaagtctaactcaattggttgagtaaagtgcgtgggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA