1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AACACGAACCTCAAACCTCAGACAGAACCAAAAACACACTTCTTCTCTTCTTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACGgtgagcttctccttctctctctctctctctctctctctctctctcaatcaccgttttctctgcatcatgttcacaccccatcaaaaaggtcacacaaagt...
species | Glycine max |
transcript | GLYMA02G08700.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACG TGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGAEST: gi|151408897|gb|EV278705.1|EV278705
genomic: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACGgtgagcttct ... gttgatgcagTGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGA
EST: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAATG TGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGAEST: gi|13789409|gb|BG652000.1|BG652000
genomic: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACGgtgagcttct ... gttgatgcagTGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGA
EST: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACG TGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGAEST: gi|192329849|gb|FK023353.1|FK023353
genomic: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACGgtgagcttct ... gttgatgcagTGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGA
EST: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACG TGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGA
genomic: TTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACGgtgagcttct ... gttgatgcagTGCTATGGTGTTTAGTTAGGAAACACCGGTGGTAAAATTGTACGAAGCAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACACGAACCTCAAACCTCAGACAGAACCAAAAACACACTTCTTCTCTTCTTCCATTCTCTAACGCTATCAGCATCAACACAGTGTCACATCCATTAACGgtgagcttctccttctctctctctctctctctctctctctctctcaatcaccgttttctctgcatcatgttcacaccccatcaaaaaggtcacacaaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacaccc