1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGAAAATCTAAAGAGAAAGTGATTCCCTCAGCGGTGACAGAACGCTTCCTTGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgcattttattttcttagctactctttctcttctgagaacgtgattgaacagataattttatagcacatgcatactgtgatttctctttgttt...
species | Glycine max |
transcript | GLYMA02G08440.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAACEST: gi|254343607|gb|GR857363.1|GR857363
genomic: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
EST: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAACEST: gi|298162968|gb|HO011701.1|HO011701
genomic: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
EST: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAACEST: gi|9985951|gb|BE659957.1|BE659957
genomic: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
EST: GAGAAAACAAGATGAG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAACEST: gi|298172800|gb|HO020354.1|HO020354
genomic: GAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
EST: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGCG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAACEST: gi|213619772|gb|DB967394.1|DB967394
genomic: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
EST: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAACEST: gi|192302804|gb|FG998486.1|FG998486
genomic: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
EST: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAG CCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
genomic: TGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgc ... tataatacagCCGCCACCCTTCTGTCAAATGGGCTCAGACGTCTGATGTACTCTACTTAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAAATCTAAAGAGAAAGTGATTCCCTCAGCGGTGACAGAACGCTTCCTTGAGCAGAGAAACCCAAGCAGATCGATTACTCTTGAGAAAACAAGATGAGgtgcgcatgcattttattttcttagctactctttctcttctgagaacgtgattgaacagataattttatagcacatgcatactgtgatttctctttgttt
- - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG