1 5' 3' | 2 5' 3' | 3 5' 3' |
CGAGTTCGCTCTACAAGAATTCGTCCTTCTTTGCTCGCTGCTCCGCCGAGACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtcatatgttgtgtctttatgtttttttcctctgaaattaccttctagtccctaactttgttaaaatgtgtttgattttgggacaaaattggtc...
species | Glycine max |
transcript | GLYMA02G06520.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCA GACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCCGGGTCATGTTACCTEST: gi|298169602|gb|HO020962.1|HO020962
genomic: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtca ... tgtttttcagGACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCCGGGTCATGTTACCT
EST: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCA GACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCCGGGTCATGTTACCTEST: gi|298182360|gb|HO026535.1|HO026535
genomic: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtca ... tgtttttcagGACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCCGGGTCATGTTACCT
EST: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCA GACTAATTTTGGTGGCG
genomic: ACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtca ... tgtttttcagGACTAATTTTGGTGGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGTTCGCTCTACAAGAATTCGTCCTTCTTTGCTCGCTGCTCCGCCGAGACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAgtacgtgtcatatgttgtgtctttatgtttttttcctctgaaattaccttctagtccctaactttgttaaaatgtgtttgattttgggacaaaattggtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggacaaaa