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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCGCTGTTCACACCCTCCCTCTCACATGTCAAACCTCAAGCTACCCATCTCCCTCTGAAACACTTTTTCTCCCCTTTCCTTTTTTTACACCTTTCACTGgtatcccacctatcaacttctctgagattcaatttctgtatatacaatagttctatattgtgtctgattagtttaattcctctgtagtataatactattt...

Basic information

species Glycine max
transcript GLYMA02G05670.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209716206|gb|BW654254.1|BW654254
EST:     TCCCTCTG-AACACTTTTTCTCCCCTTTCCNNNNNNNACACCTTTCACTG                         TGTAAATAGGTAGGTCATATTGCCAGAGGATTTTGGCTATAATGACTGCAT
genomic: TCCCTCTGAAACACTTTTTCTCCCCTTTCCTTTTTTTACACCTTTCACTGgtatcccacc ... tctcacaaagTGTAAATAGGTAGGTCATATTGCCAGAGGATTTTGGCTATAATGACTGCAT
EST: gi|213611913|gb|DB958923.1|DB958923
EST:     TCCCTCTG-AACACTTTTTCTCCCCTTTCCNNNNNNNACACCTTTCACTG                         TGTAAATAGGTAGGTCATATTGCCAGAGGATTTTGGCTATAATGACTGCAT
genomic: TCCCTCTGAAACACTTTTTCTCCCCTTTCCTTTTTTTACACCTTTCACTGgtatcccacc ... tctcacaaagTGTAAATAGGTAGGTCATATTGCCAGAGGATTTTGGCTATAATGACTGCAT