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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTTTAAAGAGACCCAACCCCTCTCTTTTCTTTTCTTCAGTTCGGTGGAAGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttgatgccttttgaatctcctcttcacaatggtttcgatcctttttcttttggcattttactcgaaataaatcttcaatttttacgaaatgac...

Basic information

species Glycine max
transcript GLYMA02G05370.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12773251|gb|BG238178.1|BG238178
EST:     GTAGCACCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAGTG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|192331395|gb|FK019896.1|FK019896
EST:     AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|9899629|gb|BE608597.1|BE608597
EST:     CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298185233|gb|HO030446.1|HO030446
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|192330329|gb|FK019879.1|FK019879
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298186516|gb|HO037149.1|HO037149
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAACCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|6070919|gb|AW100306.1|AW100306
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|13480012|gb|BG509355.1|BG509355
EST:     CGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|16996691|gb|BM086063.1|BM086063
EST:     GCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|254314706|gb|GR829699.1|GR829699
EST:     GCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|24205192|gb|BU964445.1|BU964445
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|14011931|gb|BG726853.1|BG726853
EST:     GCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|207823869|gb|GD794544.1|GD794544
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298171206|gb|HO016238.1|HO016238
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGGGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|207714384|gb|GD696437.1|GD696437
EST:     GGGCAGCGTAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GGGCAGCG-AATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298169563|gb|HO020923.1|HO020923
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|193552807|gb|FK505686.1|FK505686
EST:     CTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|209713029|gb|BW684323.1|BW684323
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|192306160|gb|FG995024.1|FG995024
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|42723142|gb|CK769041.1|CK769041
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|7686422|gb|AW757070.1|AW757070
EST:     GCAGCAACGGAAGCTCTATCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298185840|gb|HO031001.1|HO031001
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|208174091|gb|GD968570.1|GD968570
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|24136699|gb|BU927209.1|BU927209
EST:     TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|209711384|gb|BW665355.1|BW665355
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|24205136|gb|BU964389.1|BU964389
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298166568|gb|HO010007.1|HO010007
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTT-GGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|18730191|gb|BM525737.1|BM525737
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298172842|gb|HO019826.1|HO019826
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATCTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298178096|gb|HO027479.1|HO027479
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298185836|gb|HO030997.1|HO030997
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|9901739|gb|BE610707.1|BE610707
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|207799867|gb|GD768264.1|GD768264
EST:     AGAAGCCGTAGCAGCAGCGGGAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|18039968|gb|BM308262.1|BM308262
EST:     AGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|13479334|gb|BG508677.1|BG508677
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298165950|gb|HO008921.1|HO008921
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298186477|gb|HO037110.1|HO037110
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|26058865|gb|CA801779.1|CA801779
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|24205206|gb|BU964459.1|BU964459
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|24135604|gb|BU926114.1|BU926114
EST:     GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|7232947|gb|AW568298.1|AW568298
EST:     GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|18039341|gb|BM307635.1|BM307635
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|193536651|gb|FK491795.1|FK491795
EST:     CTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|193509200|gb|FK466580.1|FK466580
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|11413001|gb|BF425021.1|BF425021
EST:     CGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|23727082|gb|BU761559.1|BU761559
EST:     CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|4397559|gb|AI496556.1|AI496556
EST:     GCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: GCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|16347113|gb|BI972708.1|BI972708
EST:     TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|213596261|gb|DB960218.1|DB960218
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|18040328|gb|BM308622.1|BM308622
EST:     CAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: CAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298173423|gb|HO016759.1|HO016759
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|208277481|gb|GE079472.1|GE079472
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298169333|gb|HO020693.1|HO020693
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|208223691|gb|GE020904.1|GE020904
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|15662189|gb|BI699560.1|BI699560
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|298184731|gb|HO029944.1|HO029944
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|6567212|gb|AW234823.1|AW234823
EST:     AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: gi|213602877|gb|DB972451.1|DB972451
EST:     AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG                         GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTTTTAAAGAGACCCAACCCCTCTCTTTTCTTTTCTTCAGTTCGGTGGAAGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttgatgccttttgaatctcctcttcacaatggtttcgatcctttttcttttggcattttactcgaaataaatcttcaatttttacgaaatgac

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