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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTCGCAGTCGGCAACTACCGATCTTTCATTGCCGCCGCCGACGCCTTAATCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcgatttccaattcatttttttaataatattttggttcgtattaaaattcatgctttataatattgtatttgcttattgttgcaattgcaatct...

Basic information

species Glycine max
transcript GLYMA02G04920.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254335101|gb|GR844886.1|GR844886
EST:     TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
EST: gi|193466896|gb|FK430315.1|FK430315
EST:     GGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: GGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
EST: gi|208184356|gb|GD984552.1|GD984552
EST:     CGCCGGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: CGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
EST: gi|209722418|gb|BW682794.1|BW682794
EST:     TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
EST: gi|209721096|gb|BW666357.1|BW666357
EST:     TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
EST: gi|254327754|gb|GR834719.1|GR834719
EST:     TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: TCGCCATTCGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT
EST: gi|193626763|gb|FK574443.1|FK574443
EST:     CGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTG                         ATAAATGAGATCCCAAAGCCGACATCTGGATGCACTGAGTTCATAGAATCT
genomic: CGCCAGGAAGTTTCTTCCATTGACAACCACCTTGAATCTCTGgtattctcga ... tctgtcacagATAAATGAGATCCCAAAGCTGACATCTGGATGCACTGAGTTCATAGAATCT