1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GCTTGCCCATGGCCTTTTGGTCCAATGCAGCATAAACACCTAATAGTTTAGCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaagttcaaccacactaatccacaaattcgatacccttttggttatctcttcaatttcctctccttttccaattaagttgttgaaatttgcac...
species | Glycine max |
transcript | GLYMA02G03990.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAG GGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTEST: gi|20449478|gb|BQ253602.1|BQ253602
genomic: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaa ... tgcatggcagGGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGT
EST: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAG GGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTEST: gi|23064138|gb|BU578911.1|BU578911
genomic: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaa ... tgcatggcagGGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGT
EST: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAG GGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTEST: gi|13480785|gb|BG510128.1|BG510128
genomic: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaa ... tgcatggcagGGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGT
EST: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAG GGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTEST: gi|192312289|gb|FK005293.1|FK005293
genomic: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaa ... tgcatggcagGGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGT
EST: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAG GGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGT
genomic: GCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaa ... tgcatggcagGGTGCAAAGAGAGTCATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTGCCCATGGCCTTTTGGTCCAATGCAGCATAAACACCTAATAGTTTAGCCATTTTTTCTCTCGTTTTATTCAGTAACAACAATTTCATTCAGTCAAGgtagaataaagttcaaccacactaatccacaaattcgatacccttttggttatctcttcaatttcctctccttttccaattaagttgttgaaatttgcac
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