1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TCCTTCAACACACTCTCAGAAGTTTGTGCAGCCATGAAAATTCTCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagagggaaattagagagatcaatcaattctatatatagctccttgaaagagagattttgttcgctagctaggcacatacatcacacatatatat...
species | Glycine max |
transcript | GLYMA02G03740.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAA GTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGEST: gi|192306018|gb|FG993636.1|FG993636
genomic: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagag ... aattatatagGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTG
EST: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAA GTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGEST: gi|9564215|gb|BE473724.1|BE473724
genomic: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagag ... aattatatagGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTG
EST: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAA GTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGEST: gi|209709438|gb|BW668366.1|BW668366
genomic: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagag ... aattatatagGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTG
EST: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAA GTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGEST: gi|151396617|gb|EV266494.1|EV266494
genomic: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagag ... aattatatagGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTG
EST: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAA GTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTG
genomic: GTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagag ... aattatatagGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCTTCAACACACTCTCAGAAGTTTGTGCAGCCATGAAAATTCTCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAgtaaggagagggaaattagagagatcaatcaattctatatatagctccttgaaagagagattttgttcgctagctaggcacatacatcacacatatatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaagaga