1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TATGGAGATGGCGCTGCCAATCAGGGACAGCTCTTTGAGGCGCTTAATATCGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTgtaagtcagtgaagggttgttttttttttttttccggcaaatgttagttgctagtattgttagttgggggattcgaacccatgaactttccccctttccc...
species | Glycine max |
transcript | GLYMA02G03080.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACT ATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAEST: gi|51338002|gb|CO981868.1|CO981868
genomic: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTgtaagtcagt ... gttaatgtagATGGGATGGGGACTGCGGAGTGGAGAGCTGCCA
EST: GCGAGAATAATCACT ATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATAEST: gi|254322999|gb|GR839912.1|GR839912
genomic: GCGAGAATAATCACTgtaagtcagt ... gttaatgtagATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATA
EST: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACT ATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATAEST: gi|15664218|gb|BI701589.1|BI701589
genomic: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTgtaagtcagt ... gttaatgtagATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATA
EST: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACT ATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATAEST: gi|19054086|gb|BM732753.1|BM732753
genomic: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTgtaagtcagt ... gttaatgtagATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATA
EST: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACT ATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATAEST: gi|58016174|gb|CX702916.1|CX702916
genomic: CGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTgtaagtcagt ... gttaatgtagATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATA
EST: TGCGAGAATAATCACT ATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATA
genomic: TGCGAGAATAATCACTgtaagtcagt ... gttaatgtagATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGGAGATGGCGCTGCCAATCAGGGACAGCTCTTTGAGGCGCTTAATATCGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTgtaagtcagtgaagggttgttttttttttttttccggcaaatgttagttgctagtattgttagttgggggattcgaacccatgaactttccccctttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttccccc