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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATTCTCTGTTCACGTTCACATCTTTTATAACCCGTTCCATCTTTTGCTTTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAGgttcatcttgttcttttcttaaccccatttttgcttaaaaaattgtttttgatgttctaggaaggtttgtttatgaaaccaagtgatgcccatttgcttt...

Basic information

species Glycine max
transcript GLYMA02G02400.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298178672|gb|HO024407.1|HO024407
EST:     TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAG                         GTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
genomic: TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAGgttcatcttg ... tggaatatagGTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
EST: gi|207726195|gb|GD701483.1|GD701483
EST:     TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAG                         GTTGTGACTTGTAAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
genomic: TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAGgttcatcttg ... tggaatatagGTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
EST: gi|298164392|gb|HO014037.1|HO014037
EST:     TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAG                         GTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
genomic: TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAGgttcatcttg ... tggaatatagGTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
EST: gi|298180824|gb|HO022263.1|HO022263
EST:     TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAG                         GTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA
genomic: TTCTCCTGGGACTGCACCCTTCACTCACAAGTCACCAGTCTCTCTCTTAGgttcatcttg ... tggaatatagGTTGTGACTTGTGAGGATGTCAACTCCTGCAAGGAAGAGACTCATGAGAGA