1 5' 3' | 2 5' 3' | 3 5' 3' |
CTTTCAGAGGCAGAAATCAGGCAGCTTTGTGCGGTTTCCAGAGATATCTTTTTGAAGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATGTGgtatctatatgccaatcccattttatttttctttatgttttttagtcacttattagtttcttagtcaattttagtatatggccatgatattttttttttt...
species | Glycine max |
transcript | GLYMA02G00850.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAG-TATGTTACCAG GAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTEST: gi|8286563|gb|BE024122.1|BE024122
genomic: AGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATG-T----Ggtatctatat ... atgttaccagGAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGT
EST: TTTGAAGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATGTG GAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTG
genomic: TTTGAAGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATGTGgtatctatat ... atgttaccagGAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTCAGAGGCAGAAATCAGGCAGCTTTGTGCGGTTTCCAGAGATATCTTTTTGAAGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATGTGgtatctatatgccaatcccattttatttttctttatgttttttagtcacttattagtttcttagtcaattttagtatatggccatgatattttttttttt
- - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC