1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTCACACTCGATGGCTTCGTGCAGAGATTGGAGGAAGAGTTGACAAAGGTCGAGGCTTTCAAACGCGAGCTTCCTCTCTGCATTCTCCTCCTAAACGATGgtgcctgcttagtgcttgaatttcaatgttatatcattgttgtgttgtgttgtgtgtgtttttttagtaacagttttttttgtgttgcgtgtgtgcag
species | Glycine max |
transcript | GLYMA01G39040.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAGGCTTTCAAACGCGAGCTTCCTCTCTGCATTCCTCCTCCTAAACGATG CTATAGCGAGATTGAAGGAGGAAAAAGTGAAGTGTTCGGGAATGCAAGATCEST: gi|6070786|gb|AW100173.1|AW100173
genomic: GAGGCTTTCAAACGCGAGCTTCCTCTCTGCATT-CTCCTCCTAAACGATGgtgcctgctt ... gtgtgtgcagCTATAGCGAGATTGAAGGAGGAAAAAGTGAAGTGTTCGGGAATGCAAGATC
EST: AGGCTTTCAAACGCGAGCTTTCTCTCTGCATTTTTCCTCC-AAACCGATG CTATAGCGAGATTGAAGGAGGAAAAAGTGAAGTGTTCGGGAATGCAAGAT
genomic: AGGCTTTCAAACGCGAGCTTCCTCTCTGCATTCT-CCTCCTAAAC-GATGgtgcctgctt ... gtgtgtgcagCTATAGCGAGATTGAAGGAGGAAAAAGTGAAGTGTTCGGGAATGCAAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCACACTCGATGGCTTCGTGCAGAGATTGGAGGAAGAGTTGACAAAGGTCGAGGCTTTCAAACGCGAGCTTCCTCTCTGCATTCTCCTCCTAAACGATGgtgcctgcttagtgcttgaatttcaatgttatatcattgttgtgttgtgttgtgtgtgtttttttagtaacagttttttttgtgttgcgtgtgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC