1 5' 3' | 2 5' 3' | 3 5' 3' |
TCAAGAGATTGTCCAATCCATCGTTGCCAAGGCAGTGGCAAAAGAACCCCGCATGGCTGCTTCGTTGCTCAGACTACATTTCCATGATTGTTTTGTCAAGgtctctatatataacagataacaaaccccataacttagttaatataaatagaaaattcatagtagtggcataactatctgatctatgagtcttgcttatg...
species | Glycine max |
transcript | GLYMA01G37630.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGATTGTTTTGTCAAG GGCTGTGATGCATCGGTGCTGCTAGATAGCAGTGGAACTATTATCAGTGAGEST: gi|9819343|gb|BE554856.1|BE554856
genomic: TGATTGTTTTGTCAAGgtctctatat ... aatgtttcagGGCTGTGATGCATCGGTGCTGCTAGATAGCAGTGGAACTATTATCAGTGAG
EST: GTTTTGTCAAG GGCTGTGATGCATCGGTGCTGCTAGATAGCAGTGGAACTATTATCAGTGAG
genomic: GTTTTGTCAAGgtctctatat ... aatgtttcagGGCTGTGATGCATCGGTGCTGCTAGATAGCAGTGGAACTATTATCAGTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAAGAGATTGTCCAATCCATCGTTGCCAAGGCAGTGGCAAAAGAACCCCGCATGGCTGCTTCGTTGCTCAGACTACATTTCCATGATTGTTTTGTCAAGgtctctatatataacagataacaaaccccataacttagttaatataaatagaaaattcatagtagtggcataactatctgatctatgagtcttgcttatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatagaaa