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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGACCTAGACCAGACACCAACGTGGGCCGTTGCTGCTGTCTGTACTGTTTTCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACGgtatgtatgcagttaatgaaactctgaacctctctttctgtaattattattattattattgttttcgttaactctctgtttgtgcgtttccctttgaatt...

Basic information

species Glycine max
transcript GLYMA01G36170.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393047|gb|EV262922.1|EV262922
EST:     TCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACG                         TGGCTTGGACAAAAGAAAAAGAAGGCTTTGCTTGAAGCTCTGGAGAAGGTC
genomic: TCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACGgtatgtatgc ... ttttcttcagTGGCTTGGACAAAAGAAAAAGAAGGCTTTGCTTGAAGCTCTGGAGAAGGTC
EST: gi|19268818|gb|BM885074.1|BM885074
EST:     TCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACG                         TGGCTTGGACAAAAGAAAAAGAAGGCTTTGCTTGAAGCTCTGGAGAAGGTC
genomic: TCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACGgtatgtatgc ... ttttcttcagTGGCTTGGACAAAAGAAAAAGAAGGCTTTGCTTGAAGCTCTGGAGAAGGTC
EST: gi|192334105|gb|FK026262.1|FK026262
EST:     TCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACG                         TGGCTTGGACAAAAGAAAAAGAAGGCTTTGCTTGAAGCTCTGGAGAAGGTC
genomic: TCATCTTGGTATCCATAGCACTCGAAAAGAGTCTCCACAAAGTTGGGACGgtatgtatgc ... ttttcttcagTGGCTTGGACAAAAGAAAAAGAAGGCTTTGCTTGAAGCTCTGGAGAAGGTC