1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AACAATTAGGGTTTTTCAAATTCAACATTTCTTCGTTTTCCAATTTAGGGTTTTTTTCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAGgtaatactacattgcattgttttttcaattttctttatcaccccccccccccccccccaaacttcgaattgatttattctgttctcttgaatttctgcaa...
species | Glycine max |
transcript | GLYMA01G36040.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: NNNNNNNCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAG GAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAAEST: gi|213619519|gb|DB963429.1|DB963429
genomic: TTTTTTTCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAGgtaatactac ... gttggtgtagGAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAA
EST: NNNNNNNCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAG GAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAAEST: gi|151407600|gb|EV277415.1|EV277415
genomic: TTTTTTTCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAGgtaatactac ... gttggtgtagGAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAA
EST: TTTACCCTTCAGTTGCAATTCGTACAG GAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAAEST: gi|192310423|gb|FG999488.1|FG999488
genomic: TTTACCCTTCAGTTGCAATTCGTACAGgtaatactac ... gttggtgtagGAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAA
EST: NNNNNNNCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAG GAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAA
genomic: TTTTTTTCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAGgtaatactac ... gttggtgtagGAGGTTGTTCTATTCTCATGCACAATTGAAATTGGCAAATGAGTGATGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACAATTAGGGTTTTTCAAATTCAACATTTCTTCGTTTTCCAATTTAGGGTTTTTTTCTCCTCGCTCTGTTGCTTTACCCTTCAGTTGCAATTCGTACAGgtaatactacattgcattgttttttcaattttctttatcaccccccccccccccccccaaacttcgaattgatttattctgttctcttgaatttctgcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcacccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccccc