1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGACCTTGTCGTTAGCTTTGTTAATATTCTTAAGCAAGTTGCAGAGCATAGGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGgttctattaaaattcaacattaatggtcctgtttggataaatttcttcgtgaacactctagtataagaaaataagaagctaaaatgaattgaggaagtta...
species | Glycine max |
transcript | GLYMA01G35650.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGTTGCCGAAGACTTATGATTATNACCAAATGCCTGCACCTTTCATTCAG ATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCTEST: gi|193481036|gb|FK444769.1|FK444769
genomic: GGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGgttctattaa ... actcgtgaagATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCT
EST: GGTTGCCGAAGACTTATGATTATCACCAAATGC-TGCACCTTTCATTCAG ATTTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCEST: gi|193345712|gb|FK313781.1|FK313781
genomic: GGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGgttctattaa ... actcgtgaagATT-AAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGC
EST: GGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAG ATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAEST: gi|193401540|gb|FK368005.1|FK368005
genomic: GGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGgttctattaa ... actcgtgaagATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACA
EST: GGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAG ATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCT
genomic: GGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGgttctattaa ... actcgtgaagATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACCTTGTCGTTAGCTTTGTTAATATTCTTAAGCAAGTTGCAGAGCATAGGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGgttctattaaaattcaacattaatggtcctgtttggataaatttcttcgtgaacactctagtataagaaaataagaagctaaaatgaattgaggaagtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaataa