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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTACTATGCTGTTGTTTTGACCAATTATGGCCCTGCTTTGTATGCTGGGGGACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTGgtgagcttctagagctgttttttttttatcttgaattttgtgatttttgaggttctttgagttttttgatttgttttataggaaattcagtgtaagaagg...

Basic information

species Glycine max
transcript GLYMA01G34270.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393214|gb|EV263089.1|EV263089
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACTGATCCGGGC
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTGgtgagcttct ... gattttgcagTTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGC
EST: gi|213600372|gb|DB966165.1|DB966165
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGC
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTGgtgagcttct ... gattttgcagTTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGC
EST: gi|213614042|gb|DB971103.1|DB971103
EST:     GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTG                         TTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGC
genomic: GACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATTTTGTTTCATAGCTTGgtgagcttct ... gattttgcagTTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGC