Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|11689001|gb|BF596607.1|BF596607EST: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAG GGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
genomic: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAGgtttaattcc ... tctgatttagGGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
EST:
gi|192301659|gb|FG994381.1|FG994381EST: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAG GGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
genomic: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAGgtttaattcc ... tctgatttagGGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
EST:
gi|8826720|gb|BE210450.1|BE210450EST: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAG GGATACCGGGTTGGGAGAGAAGATGAAACAGGTGGTGGGAACGGTGGTTTC
genomic: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAGgtttaattcc ... tctgatttagGGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
EST:
gi|15201950|gb|BI425143.1|BI425143EST: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAG GGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
genomic: TGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAGgtttaattcc ... tctgatttagGGATACCGGGTTGGGAGAGAAGATGAAGCAGGTGGTGGGAACGGTGGTTTC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTTCGTTTCCCCTTCTCATCGAATCGAAGCGCCGCACCGTGTTTCTTCTCTGCCTGAATAACGCAAAGAAAATTGAAGCATCCTAAGGGTTGTTTCTAAGgtttaattcccctcttctatgctttaatatcctttttcgtttattcaattttatttaaggttttaactctgaaaatgtgttaattttgtgaaatatgtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC