1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GCCAAGGACCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCCTCGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctcttcatcactgttttcaattcatctttttaataatattgatactgatagtaattaatttggattctgatgctgcttcag
species | Glycine max |
transcript | GLYMA01G03610.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTATEST: gi|213593280|gb|DB966105.1|DB966105
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTATEST: gi|14126517|gb|BG790955.1|BG790955
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTATEST: gi|18717773|gb|BM522996.1|BM522996
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTATEST: gi|20814918|gb|BQ299396.1|BQ299396
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTATEST: gi|213587349|gb|DB955515.1|DB955515
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAAACGGGAAGTGCGGATCAGACCGCCAAGCTAEST: gi|9899499|gb|BE608467.1|BE608467
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAA-CGGGAAGTGCGGATCAGACCGCCAAGCTA
EST: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAA GAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
genomic: CGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctctt ... gctgcttcagGAGATTCGGGTCGGCTCATAACGGGAAGTGCGGATCAGACCGCCAAGCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCAAGGACCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCCTCGGCACCTACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGACGTCTCAAgcaagctcttcatcactgttttcaattcatctttttaataatattgatactgatagtaattaatttggattctgatgctgcttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC