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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCTAGAGGAACAACACCACTTGTCACTCTTCCATTGTTGCTTTCAACACTTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGgtgagttaagtttttctcttcttttttgttattaaatttttttggttttggaaagtttcccatttgtgattttggttgaacaggatttttttccttgatt...

Basic information

species Glycine max
transcript GLYMA01G02850.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208076741|gb|GD877336.1|GD877336
EST:     TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCG                         GAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
genomic: TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGgtgagttaag ... tgttatgcagGAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
EST: gi|7147128|gb|AW509050.1|AW509050
EST:     TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCG                         GAATTGAATGCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
genomic: TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGgtgagttaag ... tgttatgcagGAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
EST: gi|26043675|gb|CA782127.1|CA782127
EST:     TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCG                         GAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
genomic: TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGgtgagttaag ... tgttatgcagGAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
EST: gi|7147562|gb|AW509484.1|AW509484
EST:     TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCG                         GAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
genomic: TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGgtgagttaag ... tgttatgcagGAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
EST: gi|193323273|gb|FK292519.1|FK292519
EST:     TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCG                         GAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG
genomic: TTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGgtgagttaag ... tgttatgcagGAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTG